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You will be updated with latest job alerts via emailThe VIB-UGent Center for Plant Systems Biology (PSB) is a world-leading plant science institute located at the heart of a renowned plant biotechnology campus in Ghent Belgium. Its mission is to unravel plant biological processes and translate this knowledge into value for society.
The Functional Phosphoproteomics group tackles early temperature signalling in plants such as the model plant Arabidopsis thaliana and the crop plants wheat and soybean. To unravel this we focus on dynamic changes in protein phosphorylation status since temporary and reversible phosphorylation of proteins is essential in regulating various processes. Through a phosphoproteomics approach the lab has identified potential key regulators of thermomorphogenesis in A. thaliana and wheat which we started to functionally characterize.
The Vascular Development group studies plant vascular development at the interface between developmental biology cell biology and evolutionary biology. We like to implement novel omics technologies such as single cell approaches and chemical biology to help us answering our biological questions.
The Brassinosteroid group studies the function of brassinosteroid hormones in stomatal development focusing on mechanisms of signal integration between brassinosteroid and stomatal signalling pathways. Currently the group explores how GSK3-like kinases key negative regulators of brassinosteroid signalling achieve signalling specificity through scaffold proteins using single-cell cell biology and proteomics approaches.
The Advanced Live Cell Imaging group (https:www// studies endomembrane trafficking in Arabidopsis with a strong focus on clathrin-mediated endocytosis. In the framework of this project the Van Damme lab is interested in how the interplay between the various secretory carrier membrane proteins (SCAMPs) and the various types of plasma membrane intrinsic proteins (PIPs) controls stomatal dynamics.
For this project the PSB labs will collaborate with the Gevaert lab of the neighbouring VIB-UGent Center for Medical Biotechnology One of the Gevaert labs research interest is low-input to single-cell mass spectrometry-based proteomics for which they have swift access to state-of-the-art instruments. They are particularly interested in pushing the boundaries of this emerging research field by zooming in on protein modifications as well.
The stomatal lineage represents an ideal model system due to the wealth of information on both development and the dynamic changes due to environmental conditions; and the availability of many stage-specific marker lines and scRNA-seq data. There is however great variability in stomatal responses even in a single leaf under stress conditions where subsets of stomata close while others remain open. Currently there are no markers to distinguish between these different stomatal populations. We therefore ultimately need single cell resolution to understand the dynamic changes in protein abundance and ideally in protein phosphorylation events in stomata during stress responses.
The consortium of labs is looking to recruit 1 highly-motivated postdoctoral researcher who will be involved in elucidating the underlying signalling mechanisms that play a role in regulating plant growth under a changing climate especially high temperature. The applicant will be tasked with mapping the dynamic changes in the stomata (phospho)proteome through low-input proteomics and single-cell mass spectrometry-based proteomics. First under control conditions to establish the methodology and secondly under abiotic stress conditions.
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