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Research ScientistEngineer, Deep Brain Two Photon Imaging and Optogenetics

Astera Institute


Job Location:

Alameda, CA - USA

Yearly Salary: USD 135000 - 220000
Posted: 22 August 2026 (10 hours ago)
Application Deadline: 19 November 2026
Vacancies: 1 Vacancy

Job Summary

Company Overview

Astera Neuro part of the Astera Institute is building the tools to decipher and ultimately write the neural codes behind perception thought behavior and internal state. Since these tools dont yet exist were assembling a founding team of neuroscientists computational scientists and engineers to build them (hardware software and methods) and use them to study neural activity at unprecedented scale with direct relevance to neurological and psychiatric disease. We do high-risk high-reward science in a well-resourced collaborative environment with competitive pay and share our work openly under Asteras Open Science Policy.

Position Summary

Were hiring a PhD-level scientist/engineer to join Astera Neuros neuroscience team working to read write and perturb the contents of cognition in the primate brain at single-cell resolution. Astera Neuro is Asteras initiative to decode how patterns of neural activity become the thoughts perceptions and memories of conscious experience. We work from the hypothesis that the brain uses a compositional architecture and we aim to move neuroscience from observation to engineering by reading from and writing to neural circuits at scale.

Your initial assignment is to develop and optimize an optical implant for high resolution two photon imaging and optogenetics deep in the brain. While parallel Astera efforts target surface structures with conventional cranial windows many key structures for cognition sit in brain sulci millimeters below the surface. Youll oversee the full toolkit development: optimizing the optics (GRIN lenses microprisms micro-objectives) the surgical implantation procedure and integration with the two photon holographic microscope. The work spans optical engineering to systems and cognitive neuroscience.

The ideal candidate is an experimentalist who can carry the work end-to-end: designing a GRIN lens system in the morning running a closed-loop holographic write-in on the rig in the afternoon and writing the population-analysis pipeline that evening. You want institutional support and the freedom to move fast on a problem that matters.

What Youll Do

  • Design and iterate GRIN lens and/or microprism assembly for deep brain imaging in the primate brain with early optimization in rodents.

  • Develop and help execute the surgical implantation procedure

  • Run two-photon imaging and holographic photostimulation experiments: read population activity during the task then write in and perturb the held representation at single-cell resolution.

  • Run holographic targeting power calibration and closed-loop stimulation on the all-optical rig working with our optics engineering team.

  • Lead computational analysis of large-scale neural population data including dimensionality reduction population decoding GLMs and circuit-level inference.

  • Set the viral and transgenic expression strategy including soma-targeted opsin and GCaMP.

  • Perform rodent survival surgery for the initial validation: stereotaxic viral injection chronic cranial-window implantation and headbar installation.

  • Mentor research associates and technicians and at the senior or principal level more junior scientists; contribute to hiring onboarding and lab culture.

  • Contribute to publications talks open data and tooling releases and engagement with the broader scientific community.

Who You Are

Required:

  • PhD with 0-4 years of experience in neuroscience bioengineering physics or a related field or equivalent research experience. We value demonstrated skill and relevant experience above credentials.

  • Hands-on rodent and/or primate survival surgery experience; stereotaxic injections.

  • Hands-on experience with in vivo two-photon calcium imaging and/or holographic (SLM-based) optogenetics in rodents or primates.

  • Practical experience with two-photon systems: optical alignment system characterization and in vivo use.

  • Proficiency in scientific computing for neural-data analysis; Python and/or MATLAB with Suite2p CaImAn or comparable pipelines.

Preferred/Nice to Have:

  • ZEMAX modeling

  • Experience with ultrafast pulsed lasers (Ti:Sapphire fiber) and nonlinear optics.

  • Two-photon optogenetics (SLM-based holography temporal focusing or spiral-scanning photostimulation); soma-targeted opsins such as ChRmine.

  • Prior systems neuroscience research in cortex working memory decision-making or motor/premotor circuits.

What We Value

  • Conviction that the brains internal model can be understood in full and that getting there requires a kind of science no single academic lab can do; were betting on scale deep collaboration across science and engineering and open sharing of ideas in a full-stack environment.

  • Willingness to be held to an engineering standard: our decisive tests are write-in experiments; constructing a specific percept thought or internal state not merely decoding one. What we cannot build we do not understand.

  • Comfort building on shared infrastructure rather than private projects; rigs surgical preparations and analysis pipelines are standardized so they can be shared and datasets are designed to stitch across sessions and animals.

  • Commitment to open science; we release tools data and methods and aim to create a new dynamic of rapid open exchange in neuroscience.

Why Join Us

Research Scientist at Astera Neuro running an all-optical program to read write and perturb the content of working memory in the primate cortex at single-cell resolution. You will design the implants help perform the survival surgeries it depends on and run the two-photon holographic optogenetics that causally manipulates cognition. This work sits within Astera Neuros larger effort to answer the hardest and least understood questions in neuroscience: how the brain generates thoughts intelligence and consciousness.

Astera Neuro provides a comprehensive benefits package and total compensation that is competitive and commensurate with the level of experience and qualifications.

We are an equal opportunity employer and value diversity and inclusion!


Required Experience:

IC


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