Bioinformatics Software Engineer- Pharmacological Sciences
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Job Location:
New York City, NY - USA
Monthly Salary:
Not Disclosed
Posted on:
2 days ago
Vacancies:
1 Vacancy
Job Summary
The Bioinformatics Software Engineer will collaborate with an interdisciplinary team of computational scientists on developing implementing documenting and maintaining web-based software applications used by the larger biomedical and biological scientific communities for the analysis integration and visualization of large-scale biological omics imaging and clinical datasets.
Responsibilities
- Work independently to identify and define technical requirements for tasks and timelines.
- Design build test and deploy scalable bioinformatics web-based applications in a cloud environment.
- Develop document and maintain version-controlled code.
- Mock develop and enhance interactive UI designs.
- Build Docker containers for various bioinformatics workflows.
- Maintain and enhance efficient solutions to reproducible workflow orchestrations on the cloud and local HPC.
- Author and manage technical documentation that concisely describes design and implementation details.
- Manage publish and maintain code repository (e.g. GitHub) container repository (e.g. DockerHub).
- Respond to new feature requests assist with issues raised by user base as needed.
- Report project status regularly to the Principal Investigator.
- Performs other related duties.
Qualifications
- Bachelors or Masters degree in Computer Science Informatics Mathematics Statistics Engineering or Biomedical Science.
- 1-2 years of minimum experience; or experience demonstrated through prior research projects or coursework.
- Knowledge of open-source bioinformatics tools and workflows
- Working with high performance clusters and cloud technologies
- Developing web-based applications with front ends utilizing frameworks such as React NodeJS RShiny Flask or Dash
- Building and orchestrating containers (Docker) using technologies like Kubernetes
- Extensive experience with Git or other version control systems
Key Skills
- Spring
- .NET
- C/C++
- Go
- React
- OOP
- C#
- Data Structures
- JavaScript
- Software Development
- Java
- Distributed Systems
About Company
Strength through Unity and Inclusion The Mount Sinai Health System is committed to fostering an environment where everyone can contribute to excellence. We share a common dedication to delivering outstanding patient care. When you join us, you become part of Mount Sinai’s unparalleled ... View more
