Scientist III, Bioinformatics (CAPCLIACDx)

Work Schedule

Environmental Conditions

Job Description

Do you have a passion for innovative ideas and groundbreaking discoveries With over$1 billion invested annually in R&D at Thermo Fisher Scientific youll help solve some of the worlds toughest challenges from giving cancer patients hope ensuring safe drinking water and helping law enforcement address cases through forensics. We empower our teams to put science into meaningful action and give our R&D colleagues the autonomy resources and tools they need to take science a step beyond.

Location/Division-SpecificInformation:

Sacramento CA. Relocation assistance is NOT provided.

*Must be legally authorized to work in the United States withoutsponsorship.

*Must be able to pass a comprehensive background check which includes a drug screen.

Discover Impactful Work:As a Bioinformatician based in our CAP/CLIA-certified lab you will support the development and implementation of Next Generation Sequencing (NGS) based assays within the Clinical Sequencing Division. You will apply your expertise in bioinformatics Python programming and Unix/Linux systems to develop and maintain bioinformatics pipelines analyze complex genomic data ensure compliance with regulatory standards and support clinical validations and data management tasks. Your work will directly contribute to advancing precision medicine and improving patient outcomes.

A Day in the Life:

• Pipeline Development and Maintenance:Develop optimize and maintain bioinformatics pipelines and tools using Python and other relevant scripting languages on Linux-based platforms.
• Data Analysis:Perform data analysis and interpretation of high-throughput sequencing data including DNA RNA and cell-free total nucleic acid datasets.
• Clinical Validations:Support prospective and retrospective clinical validations ensuring compliance with CAP/CLIA standards.
• LIMS Integration:Integrate bioinformatics workflows with Laboratory Information Management Systems (LIMS) to enhance data tracking and management.
• Quality Control:Implement QC tracking and trending processes to ensure data integrity and compliance with regulatory standards.
• Collaboration:Work closely with cross-functional teams including laboratory scientists clinical researchers regulatory professionals and software developers to design and implement bioinformatics solutions that meet project requirements.
• Troubleshooting:Troubleshoot and resolve technical issues related to data processing and analysis ensuring timely and accurate results.
• Documentation: Record workflows pipelines and analysis results in an easily understood and replicable manner following established principles in scientific research.
• Continuous Learning:Stay up-to-date with the latest developments in bioinformatics genomics and computational biology and apply this knowledge to improve existing pipelines and develop new solutions.

Keys to Success:

Education:

• Bachelors Degree in Bioinformatics Computational Biology Molecular Biology or a related field required.

Experience:

• 5 years of experience in bioinformatics with a focus on NGS and clinical applications.
• Established track record with Python programming bash scripting Unix/Linux systems next-generation sequencing analysis and somatic oncology genomics.
• Strong understanding of bioinformatics tools and algorithms including sequence alignment variant calling and functional annotation.
• Experience with high-throughput sequencing data analysis (e.g. NGS RNA-Seq WGS etc.).
• Familiarity with version control systems (e.g. GitHub).
• Experience working in regulated environments and familiarity with CAP/CLIA regulatory compliance and quality assurance standards.
• Experience with LIMS integration and data management systems.
• Familiarity with NGS platforms such as Ion Torrent Illumina and Element.

Knowledge Skills Abilities:

• Outstanding problem-solving skills and attention to detail.
• Strong communication and collaboration skills with the ability to work effectively in a multidisciplinary team.
• Excellent documentation skills with the ability to write clear and reproducible workflows.
• Familiarity with cloud data platforms (e.g. AWS) and containerization technologies (e.g. Docker).
• Knowledge of statistical analysis and machine learning techniques.
• Familiarity with databases and data management systems (e.g. SQL NoSQL) is a plus.

Benefits:

We offer competitive remuneration annual incentive plan bonus healthcare and a range of employee benefits. Thermo Fisher Scientific offers employment with an innovative forward-thinking organization and outstanding career and development prospects. We offer an exciting company culture that stands for integrity intensity involvement and innovation!

Compensation and Benefits

This position may also be eligible to receive a variable annual bonus based on company team and/or individual performance results in accordance with company policy. We offer a comprehensive Total Rewards package that our U.S. colleagues and their families can count on which includes:

• A choice of national medical and dental plans and a national vision plan including health incentive programs

• Employee assistance and family support programs including commuter benefits and tuition reimbursement

• At least 120 hours paid time off (PTO) 10 paid holidays annually paid parental leave (3 weeks for bonding and 8 weeks for caregiver leave) accident and life insurance and short- and long-term disability in accordance with company policy

• Retirement and savings programs such as our competitive 401(k) U.S. retirement savings plan

• Employees Stock Purchase Plan (ESPP) offers eligible colleagues the opportunity to purchase company stock at a discount

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