Nextonic Solutions is seeking a Biologist to join our vibrant team at the National Institutes of Health (NIH) supporting the National Institute on Aging (NIA) located in Baltimore MD.
The National Institutes of Health requires contractor support for laboratory and computational analysis of genomic and epigenomic data. The work supports ongoing research involving genotyping long-range sequencing and DNA methylation profiling.
Deliverables:
Sample Processing Logs - DNA extraction records and yields
Genotyping/Sequencing Outputs - Raw and processed data files
QC Reports - Standardized quality metrics and summaries
Analysis Outputs - Variant and methylation results visualizations
Scripts and Code - Documented R/Python/Bash scripts
Monthly Summary - Summary of work performed and findings
Presentation Materials - Slides or briefings for NIH staff
Statement of Work Details:
Perform DNA extraction from blood tissue or cultured cells using established protocols.
Conduct genotyping assays (e.g. SNP arrays PCR-based methods).
Support long-range sequencing workflows (e.g. library prep and sequencing using long-read platforms such as PacBio or Oxford Nanopore).
Provides technical experience needed to assist in studying the basic principles of plant and animal life.
Evaluate: Read quality coverage and depth and Sample integrity and contamination.
Flag anomalies and provide preliminary interpretation.
Assists with performing basic laboratory experiments and procedures.
Perform DNA methylation assays (e.g. bisulfite conversion array-based or sequencing-based methods).
Execute established QC pipelines for sequencing and genotyping data.
Compile and document QC metrics in standardized formats.
Modify existing scripts and pipelines to support project needs.
Perform data analysis using: R (statistical analysis and visualization) and Scripting (Python Bash or equivalent).
Conduct: Variant calling and basic annotation and DNA methylation data processing and analysis and Data integration across datasets when directed Prepares organizes and maintains various lab samples supplies and equipment.
Maintain accurate laboratory notebooks and electronic records.
Learns new laboratory techniques and procedures.
Identify routine technical issues and implement standard troubleshooting steps.
Prepare: Summary tables and figures and Written summaries of methods and results.
Present findings in internal meetings to NIH staff- Contribute to draft reports manuscripts or project updates.
Requirements
Masters Degree
Biology
Proficiency in R and at least one scripting language
Experience with QC and data visualization
Familiarity with genomic data formats (FASTQ BAM VCF)
Nextonic Solutions is seeking a Biologist to join our vibrant team at the National Institutes of Health (NIH) supporting the National Institute on Aging (NIA) located in Baltimore MD. The National Institutes of Health requires contractor support for laboratory and computational analysis of genomic a...
Nextonic Solutions is seeking a Biologist to join our vibrant team at the National Institutes of Health (NIH) supporting the National Institute on Aging (NIA) located in Baltimore MD.
The National Institutes of Health requires contractor support for laboratory and computational analysis of genomic and epigenomic data. The work supports ongoing research involving genotyping long-range sequencing and DNA methylation profiling.
Deliverables:
Sample Processing Logs - DNA extraction records and yields
Genotyping/Sequencing Outputs - Raw and processed data files
QC Reports - Standardized quality metrics and summaries
Analysis Outputs - Variant and methylation results visualizations
Scripts and Code - Documented R/Python/Bash scripts
Monthly Summary - Summary of work performed and findings
Presentation Materials - Slides or briefings for NIH staff
Statement of Work Details:
Perform DNA extraction from blood tissue or cultured cells using established protocols.
Conduct genotyping assays (e.g. SNP arrays PCR-based methods).
Support long-range sequencing workflows (e.g. library prep and sequencing using long-read platforms such as PacBio or Oxford Nanopore).
Provides technical experience needed to assist in studying the basic principles of plant and animal life.
Evaluate: Read quality coverage and depth and Sample integrity and contamination.
Flag anomalies and provide preliminary interpretation.
Assists with performing basic laboratory experiments and procedures.
Perform DNA methylation assays (e.g. bisulfite conversion array-based or sequencing-based methods).
Execute established QC pipelines for sequencing and genotyping data.
Compile and document QC metrics in standardized formats.
Modify existing scripts and pipelines to support project needs.
Perform data analysis using: R (statistical analysis and visualization) and Scripting (Python Bash or equivalent).
Conduct: Variant calling and basic annotation and DNA methylation data processing and analysis and Data integration across datasets when directed Prepares organizes and maintains various lab samples supplies and equipment.
Maintain accurate laboratory notebooks and electronic records.
Learns new laboratory techniques and procedures.
Identify routine technical issues and implement standard troubleshooting steps.
Prepare: Summary tables and figures and Written summaries of methods and results.
Present findings in internal meetings to NIH staff- Contribute to draft reports manuscripts or project updates.
Requirements
Masters Degree
Biology
Proficiency in R and at least one scripting language
Experience with QC and data visualization
Familiarity with genomic data formats (FASTQ BAM VCF)