PhD Position Project P09 "Protective and pathogenic antibody responses at barrier organ"

UKSH Universitätsklinikum Schleswig-Holstein

Job Location:

Lübeck - Germany

Monthly Salary: Not Disclosed

Posted on: 2 days ago

Vacancies: 1 Vacancy

Job Summary

Institute for Experimental Dermatology

TheDFG-funded Research Training Group (RTG) 3095Protective and pathogenic antibody responses at barrier organsis a collaborative doctoral programme jointly organized by theUniversity of LübeckandKiel University two modern and research-intensive universities with strong profiles in medicine molecular biology and life sciences. Their study programmes have consistently achievedtop rankings in the CHE Ranking the most comprehensive evaluation of study programmes at German universities.

Immunological barrier organs such as theskin intestine and lungsare continuously exposed to commensal microorganisms pathogens and environmental allergens. As a result infections as well as allergic and autoinflammatory disorders at these mucosal interfaces are frequent and represent asignificant burden to public health. Antibody-mediated immune responses play acentral rolein maintaining homeostasis at these sites: they contribute to thecontrol of pathogen invasion theregulation of gut microbiota and theinitiation and modulation of allergic reactions while also exerting regulatory functions that candownregulate inflammation.

The overarching goal of RTG 3095 is to elucidate themechanisms by which B cell responses are initiated maintained and contribute to either immunoprotection or immunopathogenesisat these immunological barrier sites. To achieve this the programme employsstate-of-the-art experimental approaches includingsingle-cell sequencingspatial transcriptomics and advanced molecular and immunological techniques. Doctoral researchers will benefit from astructured 4-year training programmethat integrates cutting-edge research with comprehensive training program involves a strong bioinformatical component in the training program and a bioinformatics project in the research program.

Start in our team

Within this framework the subproject P09 Application of artificial intelligence for the analysis of multi-parameter cytometric data sets of rare B cell subsetsled byProf. Hauke Busch and Prof. Rudolf Manzat theUniversity of Lübeck is seeking aPhD Candidate to start onApril 1 2026. The position is initially limited untilMarch 31 2030. The position is localized in the laboratory of Busch at the Department for Medical Systems Biology University of Lübeck.

What we offer:

The salary will be based on the German E13 TV-L scale (100%) if terms and conditions under collective bargaining law are fulfilled
Full-time employment currently 38.5 hours/week
Participation in the structured qualification programme of RTG 3095 including workshops courses and summer schools in state-of-the-art immunology related research
A highly stimulating research environment with access to state-of-the-art technologiessuch as single-cell sequencing and spatial transcriptomics
Excellent opportunities for scientific networking and qualification in cutting-edge immunological research

Your tasks:

Conducting a doctoral research project withinP09 focusing on the development of machine-based learning to support bioinformatics data analysis in experimental and medical samples.
Active participation in the scientific programme of the RTGs graduate training activities
Presentation and discussion of research findings within the research consortium

Your profile:

AMasters degree (or equivalent)inbioinformatics orin thelife sciencesor a related discipline fulfilling the formal requirements for enrolment as a doctoral candidate at the University of Lübeck
Excellent command of English; Knowledge ofGermanis advantageous
Experience with bioinformatics data analysis experience withRor comparable statistical software as well as interest in life science and medical science
Strong motivation to contribute your own ideas to a dynamic interactive research team
Independent structured and collaborative working style

Application:

Please submit your application until14th December 2025indicating the reference number27555.

Please include the following documents with your application:

Amotivation letter(maximum one page) which also indicates if you are also interested in other projects within the RTG 3095 (a maximum of 3 projects)
Acurriculum vitae(including a list of publications if applicable)
Certificatesand transcripts of your previous university degrees (BSc/MSc including transcripts of records)
at leastone letter of recommendation
Names andemail addresses of twopotential references

Selection process

Application to this subproject of RTG 3095 is generally considered to be an application also to the other subprojects of RTG 3095. Separate application to another subproject is not required but please indicate in your motivation letter your favored RTG3095 subprojects (see above motivation letter).

Among the written applications the most suitable candidates will be invited to a one-day symposium which will take place in January 2026 in Lübeck Germany.

For further information please contact: Prof. Hauke Busch Medical Systems Biology University of Lübeck (E-Mail: ).

Institute for Experimental DermatologyTheDFG-funded Research Training Group (RTG) 3095Protective and pathogenic antibody responses at barrier organsis a collaborative doctoral programme jointly organized by theUniversity of LübeckandKiel University two modern and research-intensive universities with...