Research Assistant in quantitative epidemiological analysis DTU Food

Global emergence and spread of antimicrobial resistance (AMR) are among the biggest challenges for human and animal health.

The Genomic Epidemiology research group at DTU National Food Institute has as the primary task to conduct targeted research with the aim of predicting and preventing infectious diseases in humans and animals and supporting global detection surveillance and control with a specific focus on AMR. The research group combines expertise in conventional and molecular microbiology with epidemiology and bioinformatics. For this the Group is engaged in several projects analyzing the genomics of single mainly bacterial isolates and metagenomes.

The group has also developed online metagenomics and WGS tools for bacterial genome analysis which are accessed by users around the world. The group has full access to Computerome (Danish National Supercomputer for Life Sciences). In addition the group ensures availability of intellectual expertise and technology to execute the project including all facilities for molecular biology experiments bioinformatics facilities and expertise in whole genome sequencing metagenomics and machine learning.

The Research Group for Genomic Epidemiology seeks a candidate for a vacant Research Assistant position focused on the epidemiology of antimicrobial resistance in livestock and associated risks to human health including how these risks are influenced by antimicrobial use in livestock production. The results generated in the project will be integrated into an existing model designed to predict how antimicrobial resistance may change under potential future changes in the regulation of antimicrobials in livestock production.

Responsibilities and qualifications

• Conducting quantitative epidemiological analyses of existing data on the resistome in Danish pig farms with a focus on how the resistome is influenced by antimicrobial usage at farm level.
• Contributing to the development of methods for classifying antimicrobial resistance genes in relation to human health risk based on resistance type genetic mobility and other relevant characteristics. This work will support the translation of epidemiological findings into assessments of human health risk.
• Supporting the integration of analytical results into an existing decision support tool that predicts changes in the resistome following changes in antimicrobial usage in livestock.
• Communicating results to national stakeholders; therefore a moderate level of proficiency in Danish is required
• Supporting an ongoing EU research project on the risk of spread of antimicrobial resistance and associated genes in pathogens.

As a formal qualification you must have atwo-year masters degree in engineering or equivalent preferably with a background in quantitative data analysis within epidemiology microbiology bioinformatics veterinary public health or a related field. Experience with quantitative epidemiological analysis programming (Python or R) data management and statistical computing is an advantage.

We offer
DTU is a leading technical university globally recognized for the excellence of its research education innovation and scientific advice. We offer a rewarding and challenging job in an international environment. We strive for academic excellence in an environment characterized by collegial respect and academic freedom tempered by responsibility.

Salary and terms of employment
The appointment will be based on the collective agreement with the Confederation of Professional Associations. The allowance will be agreed upon with the relevant union.

The period of employment is 2 years. Starting date will be 1 September or according to mutual agreement.

You can read more aboutcareer paths at DTU here.

Further information
Further information may be obtained from Associate Professor Håkan Vigre 45

More information about the research group atGenomic Epidemiology

More information about the Institute atDTU National Food Institute

If you are applying from abroad you may find useful information on working in Denmark and at DTU atDTU Moving to Denmark.

Application procedure
Your complete online application must be submitted no later than 31 July 2026 (23:59 Danish time).

Applications must be submitted as one PDF file containing all materials to be given consideration. To apply please open the link Apply now fill out the online application form and attach all your materials in English in one PDF file. The file must include:

• Application (cover letter)
• CV
• Academic Diplomas (MSc)

Applications received after the deadline will not be considered.

All interested candidates irrespective of age gender disability race religion or ethnic background are encouraged to apply. As DTU works with research in critical technology which is subject to special rules for security and export control open-source background checks may be conducted on qualified candidates for the position.

DTU National Food Institute
DTU National Food Institute conducts research into and disseminates - through advice innovation and teaching - sustainable and value-creating solutions in the area of food and health for the benefit of society. The vision is to make a difference by generating future prosperity through research into food and health. The institute works to prevent disease and promote health develop new and better food products for a growing population and create sustainable technological solutions including biosolutions. The institutes tasks are carried out in interdisciplinary collaboration within e.g. nutrition chemistry toxicology microbiology epidemiology modelling and technology. This is achieved through a strong academic environment of international top class with correspondingly skilled researchers and employees. The Institute employs approximately 390 staff members.

DTU For the benefit of society since 1829
DTU is one of Europes leading elite technical universities. Through research and education at an international top level we create solutions to the major societal challenges of our time and help secure Europes global leadership in sustainable technological development. Since Hans Christian Ørsted founded DTU almost 200 years ago our mission has remained the same: We develop and create value through the natural and technical sciences for the benefit of society. DTU has 13800 students 1600 PhD students and 6500 employees. We work in an international environment and have an inclusive stimulating and informal work culture. DTU has campuses in all parts of Denmark and in Greenland and collaborates with the best universities around the world.