Bioinformatics ScientistSoftware Intern – Summer 2026

La Jolla, CA - USA

Monthly Salary: $ 40250 - 64400

Posted on: 16-10-2025

Vacancies: 1 Vacancy

Job Summary

Help us change lives

At Exact Sciences were helpingchange how the world prevents detects and guides treatment for cancer. We give patients and clinicians the clarity needed to make confident decisions when they matter most. Join our team to find a purpose-driven career an inclusive culture and robust benefits to support your life while youre working to help others.

Position Overview

The BIFX team at Exact Sciences is seeking a summer intern. The intern will collaborate with senior bioinformatics scientists the software engineering team and the AI team to evaluate implement and improve a general-purpose Bioinformatics AI Agent for pipeline execution and data analysis. Responsibilities include participating in the end-to-end bioinformatics data analysis workflow: data collection initiating pipelines data transformation building and validating analysis models and investigating machine learning and AI-based methods. Candidates should be currently pursuing a PhD or masters degree in bioinformatics computer science mathematics or data sciences.

This position is onsite at our San Diego office.

Essential Duties

Include but are not limited to:

Develop test and analyze AI agents on AWS
Analyze genomics and NGS data
Program efficiently in Python and/or R
Use AWS computing resources effectively
Summarize work for internal discussions and results sharing

Scheduling Requirements

Ability to work designated schedule.

Minimum Qualifications

Pursuing or recently completed a Ph.D./M.S. in Computer Science Bioinformatics Data Science Mathematics or related field; strong academic record preferred
Solid background in statistical analysis and software engineering
Experience in genomics data preprocessing and AI agents
Able to perform essential duties with or without accommodation
Authorized to work in the U.S. without sponsorship

Preferred Qualifications

Demonstrated experience with deep learning frameworks and methodologies
Proven ability to handle and analyze large-scale NGS datasets
Proficient in relational database management and SQL
Familiarity with AWS Q-CLI

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Salary Range:

$40250.00 - $64400.00

The annual base salary shown is for this position located in US - CA - San Diego on a full-time basis.

Exact Sciences is proud to offer an employee experience that includes paid time off (including days for vacation holidays volunteering and personal time) paid leave for parents and caregivers a retirement savings plan wellness support and health benefits including medical prescription drug dental and vision coverage. Learn more about our benefits.

Our success relies on the experiences and perspectives of a diverse team and Exact Sciences fosters a culture where all employees can develop personally and professionally with a sense of respect and belonging. If you require an accommodation please contact us here.

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We are an equal employment opportunity employer. All qualified applicants will receive consideration for employment without regard to disability protected veteran status and any other status protected by applicable local state or federal law.

To view the Right to Work E-Verify Employer and Pay Transparency notices and Federal Federal Contractor and State employment law posters visit our compliance hub. The documents summarize important details of the law and provide key points that you have a right to know.

Required Experience:

Intern

Help us change livesAt Exact Sciences were helpingchange how the world prevents detects and guides treatment for cancer. We give patients and clinicians the clarity needed to make confident decisions when they matter most. Join our team to find a purpose-driven career an inclusive culture and robust...